rs336484 chr5:34839006 G>T
- Sequence
agttttggggcgagccggaggccg[G/T]gcgcgtctaacctgcggggaaggg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- TYY1_HUMAN ZBT40_HUMAN GABP1_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 2.17 | -0.40 | 1.50 | n/a | No Hit | |||
| ZBT40_HUMAN | 1.15 | 2.73 | 1.00 | n/a | No Hit | |||
| GABP1_HUMAN | -1.38 | 1.10 | 1.17 | n/a | n/a | |||
| HDAC1_HUMAN | -1.00 | 2.16 | 1.00 | n/a | n/a | |||
| RFX1_HUMAN | 0.34 | 0.59 | 1.50 | n/a | No Hit |
Items per page:
1 – 5 of 8