rs336560 chr3:161412295 C>A
- Sequence
tgttcactagttgttttatttgta[C/A]tagtcccaccttaactaaatagat
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.20 | 0.33 | 2.00 | -2.64 | Concordant | |||
| ESR1_HUMAN | 2.51 | -5.39 | 2.00 | n/a | No Hit |
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Motif analysis
