ADASTRA v6.1.0
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rs33691
chr5:16489495
A
>
G
Sequence
gattgtaattctgtaagacagaac[A/G]tgtgctagcagcctgtttcatccc
ASB in cell types
A549 (lung carcinoma)
THP-1 (acute monocytic leukemia)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma)
0.98
0.16
1.4·10
-4
0.92
2.00
THP-1 (acute monocytic leukemia)
0.14
2.05
1.00
9.5·10
-3
1.50
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
body mass index (bmi)
,
college completion
,
microalbuminuria
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale