rs338600 chr19:41194438 C>T

Sequence
tgggggcaggttcctggtagaggg[C/T]gtagaagctagacccggtggctcc
ASB for transcription factors
SPI1_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 0.03 1.26 1.000.03 1.43 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  parkinsons disease,  premature ovarian failure
GTEx eQTL Adipose_Subcutaneous,  Artery_Coronary,  Brain_Cortex,  Heart_Left_Ventricle,  Whole_Blood

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