rs33914778 chr16:87870886 G>A

Sequence
ccggtatgtcgggcattcctctgc[G/A]gtgataaaaccgagcgaaatctca
ASB in cell types
CAL51(Breast carcinoma) iPS-derived dermal fibroblasts
ASB for transcription factors
RARA_HUMAN KMT2C_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 2.12 -1.18 2.1·10-31.00 1.00 n/a No Hit
KMT2C_HUMAN 2.65 n/a 8.4·10-31.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia Brain_Cortex Brain_Putamen_basal_ganglia Thyroid

Download