ADASTRA v6.1.0
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rs339609
chr1:194860359
C
>
T
Sequence
ctaaaaatataaaaattaactggt[C/T]gcctgtagtcccagctacttttgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN
ZNF24_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
n/a
2.79
1.00
4.3·10
-3
3.00
n/a
n/a
ZNF24_HUMAN
n/a
3.56
1.00
0.01
3.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)