rs340124 chr5:179259589 G>A
- Sequence
gacggcatccccagggcagaggct[G/A]ggattcacgcattgctgccctcag
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.24 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hdl cholesterol change with statins, ldl cholesterol change with statins, schizophrenia, total cholesterol change with statins, years of education