ADASTRA v6.1.0
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rs340211
chr13:59859390
G
>
A
Sequence
ccagaagaaccaaaccaagttaca[G/A]ttctgcaagtccttatcaaaggta
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
P53_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P53_HUMAN
2.82
n/a
0.05
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
college completion
,
partial epilepsy
,
rheumatoid arthritis
,
systolic blood pressure (sbp)
,
total cholesterol
GTEx eQTL
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Caudate_basal_ganglia
,
Brain_Frontal_Cortex_BA9
,
Esophagus_Mucosa
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)