rs34053337 chr10:13220050 A>G
- Sequence
tgttttgcttttttaaagcaagcc[A/G]ttcttggtttttgacatctgaaaa
- ASB in cell types
- K562 (myelogenous leukemia) NB69 (neuroblastoma) GM12890 (Lymphoblastoid Cell Lines) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 1.41 | 1.44 | n/a | No Hit | |||
| CTBP1_HUMAN | -4.89 | 2.82 | 1.75 | n/a | n/a |
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