rs34076421 chr14:100548081 G>C
- Sequence
tttgagaacctcagagaagggcag[G/C]gcgggtcttcccaagagtcagtca
- ASB in cell types
- HEK293 (embryonic kidney) foreskin keratinocyte HepG2 (hepatoblastoma) SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- RBM25_HUMAN GLIS1_HUMAN CTCF_HUMAN AP2C_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 3.09 | -0.69 | 2.00 | n/a | n/a | |||
| GLIS1_HUMAN | 3.06 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 2.18 | 0.47 | 1.77 | n/a | No Hit | |||
| AP2C_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Lung, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Vagina, Whole_Blood