rs34077395 chr15:55994753 G>A

Sequence
tagcccatattactggtttgttac[G/A]taagatttttctcgtacttggccg
ASB for transcription factors
ATF3_HUMAN CEBPB_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF3_HUMAN -1.74 2.57 1.002.9·10-5 2.00 n/a No Hit
CEBPB_HUMAN 2.54 n/a 0.031.00 2.00 -1.04 Weak Concordant
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Motif analysis

CEBPB_HUMAN Weak Concordant
CEBPB_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Brain_Spinal_cord_cervical_c-1,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Prostate,  Spleen,  Thyroid

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