rs34103794 chr1:108024018 G>T
- Sequence
agccatgctggcagctgattagat[G/T]gtgcccaccgagattaaaggtggt
- ASB in cell types
- WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | -2.41 | 2.65 | 1.00 | 4.50 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Esophagus_Muscularis, Lung, Nerve_Tibial, Spleen, Thyroid, Whole_Blood