rs34107670 chr16:81855995 T>C
- Sequence
tgagccctgaccccctgttcttaa[T/C]ttggtaaggagaccagaagaaccc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.47 | 2.07 | 1.47 | n/a | No Hit | |||
| STAG1_HUMAN | -0.09 | 1.49 | 2.07 | n/a | n/a |
Items per page:
1 – 2 of 2