rs34115368 chr11:102347276 G>C

Sequence
tcgggagcgcccgggctgatccga[G/C]ccgagcgggccgtatctccttgtc
ASB in cell types
CD14+ monocytes T47D (invasive ductal carcinoma)
ASB for transcription factors
STAT1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 3.29 n/a 1.4·10-41.00 2.00 n/a No Hit
CTCF_HUMAN 0.47 1.15 1.009.1·10-3 1.72 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa

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