rs34125188 chr2:172996099 C>T
- Sequence
acctagcttactctcacttcccct[C/T]accagctccccctgcctgacctga
- ASB in cell types
- A549 (lung carcinoma) monocyte-derived dendritic cells GM12878 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.44 | -0.01 | 1.44 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.15 | 1.69 | 1.25 | n/a | n/a | |||
| SMCA4_HUMAN | 0.20 | 2.66 | 1.00 | n/a | n/a |
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