rs34137533 chr14:22748813 A>G
- Sequence
ttcagttcctcgcctaagatgggg[A/G]agagaaagaaattgccacagagtt
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages) GM18486 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SPI1_HUMAN CTCF_HUMAN IKZF1_HUMAN CDK8_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.54 | 0.00 | 1.50 | -4.86 | Concordant | |||
| CTCF_HUMAN | -0.07 | 0.90 | 1.42 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.99 | -0.23 | 1.25 | n/a | n/a | |||
| CDK8_HUMAN | -0.37 | 1.57 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Amygdala, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Spleen, Thyroid, Vagina