rs34137857 chr16:80577154 T>G
- Sequence
gtctgcctaagatggctaagatca[T/G]taaataaaacacgtaaagcatagc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- GATA3_HUMAN FOXA1_HUMAN FOS_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | n/a | 3.92 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | -4.53 | 2.77 | 1.75 | 4.85 | Concordant | |||
| FOS_HUMAN | n/a | 3.59 | 2.00 | n/a | No Hit |
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Motif analysis
