rs34174194 chr2:74458316 T>G

Sequence
actctttgtctgtacaagctcttg[T/G]tgtctgggtgagcggcggaggcgc
ASB in cell types
CD14+ monocytes PANC1 (pancreatic ductal adenocarcinoma) primary B-CLL cells
ASB for transcription factors
STAT1_HUMAN HCFC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.38 -0.20 4.8·10-41.00 2.00 n/a No Hit
HCFC1_HUMAN 1.95 n/a 8.7·10-31.00 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Esophagus_Mucosa Lung Nerve_Tibial Pituitary Testis

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