rs34202426 chr21:36060375 G>C

Sequence
gcgccggcggccgcttccaagatg[G/C]aggctgcagtgggcgggcccaagg
ASB in cell types
hNSC (neural stem cells) liver
ASB for transcription factors
TYY1_HUMAN CHD8_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN 3.02 -4.97 6.8·10-51.00 1.50 -4.69 Concordant
CHD8_HUMAN 2.27 -2.02 2.9·10-31.00 1.00 n/a n/a
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Motif analysis

TYY1_HUMAN Concordant
TYY1_HUMAN pic

Genetic associations

GTEx eQTL Esophagus_Mucosa Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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