rs342516 chr3:42443495 C>A
- Sequence
acatgggagccgaccaaaacaccc[C/A]ctggtgttagatgtggtatagcca
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.75 | -0.21 | 1.17 | -2.88 | Concordant |
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Motif analysis
