rs34260568 chr9:38682936 G>A

Sequence
acctaacaagatgactcagaatgc[G/A]gctggtcatcataaagaccagaca
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) BIN-67 (Ovarian small cell carcinoma, hypercalcemic type)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -0.07 1.98 1.006.4·10-3 1.40 n/a n/a
SMCA4_HUMAN -0.10 1.32 1.007.6·10-3 1.44 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial

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