rs34262503 chr1:24588757 G>T
- Sequence
tgtagattctgtaaatgtgatcga[G/T]gctctgctgaacacagaggctcag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SMAD4_HUMAN RARA_HUMAN SKI_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD4_HUMAN | n/a | 3.16 | 1.50 | n/a | No Hit | |||
| RARA_HUMAN | -4.34 | 2.62 | 1.50 | n/a | No Hit | |||
| SKI_HUMAN | -2.20 | 2.60 | 1.00 | n/a | n/a | |||
| FOXA2_HUMAN | -3.91 | 2.61 | 1.33 | n/a | No Hit | |||
| P66A_HUMAN | -3.24 | 3.10 | 1.00 | n/a | n/a |
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