rs34263583 chr12:108519761 A>G
- Sequence
tgctttaggggcaacagtgccacc[A/G]tgtgaccagaacaaaggttctgga
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.93 | 1.99 | 1.43 | -0.50 | Weak Discordant | |||
| STAG1_HUMAN | -2.17 | 1.99 | 1.17 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
