rs34285875 chr15:90201048 A>G
- Sequence
tagcggggacgcagcgtgtcccca[A/G]accaacgccactagcagagggtcc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.04 | -0.95 | 2.50 | n/a | No Hit | |||
| SPT5H_HUMAN | 2.12 | -1.78 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Muscle_Skeletal, Pancreas, Spleen, Testis, Whole_Blood