rs34297417 chr3:17686795 T>C
- Sequence
ttggcaatgcgtggaggcattttg[T/C]gtgtcacaactagggagaattact
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN ZN654_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.53 | 0.53 | 1.30 | n/a | No Hit | |||
| STAG1_HUMAN | 2.04 | -1.79 | 1.42 | n/a | n/a | |||
| ZN654_HUMAN | 2.78 | -5.01 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3