rs34301568 chr10:14648139 A>C
- Sequence
ttcggtattttccatttctggtca[A/C]aatctagacaacaaagaaggaagt
- ASB in cell types
- GM01310 ( Transformed lymphovlasoid cell line ) CTV-1 (Adult T acute lymphoblastic leukemia) Th1-cells
- ASB for transcription factors
- AHR_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHR_HUMAN | -0.17 | 2.25 | 1.00 | n/a | No Hit | |||
| TBX21_HUMAN | -1.26 | 1.85 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Spleen