rs34323963 chr9:89499290 G>A
- Sequence
tctgtggttcagtgccggagctct[G/A]agaatagggcttcggcccagcaaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Th1-cells
- ASB for transcription factors
- ZN687_HUMAN IKZF1_HUMAN MYB_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN687_HUMAN | -2.43 | 2.79 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -0.56 | 1.78 | 1.10 | n/a | n/a | |||
| MYB_HUMAN | 2.58 | -1.59 | 2.00 | n/a | No Hit | |||
| BHE40_HUMAN | -1.90 | 2.29 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -1.09 | 2.54 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Whole_Blood