rs34333378 chr4:13549323 G>C
- Sequence
ctccagggccaaggggaagggact[G/C]gagcaggacgcgggcgtgttggga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.61 | -4.69 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Minor_Salivary_Gland, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood