ADASTRA v6.1.0
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rs343481
chr9:6024285
C
>
G
Sequence
cctccacggagttcaaaagtgcca[C/G]ttccactttgttccctcagcttta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
1.74
-0.46
5.3·10
-3
1.00
1.72
-2.14
Concordant
Items per page:
5
1 – 1 of 1
Motif analysis
SPI1_HUMAN
Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
body mass index (bmi)
,
height
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Spleen
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
Go to motif analysis