rs34354383 chr1:224050931 T>G
- Sequence
aattactaatgcccccacccacct[T/G]gggacccgggacaggccagttggc
- ASB in cell types
- HeLa S3 (cervical adenocarcinoma) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.86 | 0.42 | 1.18 | 3.28 | Discordant |
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Motif analysis
