rs34368894 chr9:129762866 G>A
- Sequence
aaacggctgggcgtggtggctcac[G/A]cctgtaaccccagcactttgggag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- FOS_HUMAN JUND_HUMAN JUN_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | n/a | 3.58 | 1.50 | n/a | No Hit | |||
| JUND_HUMAN | n/a | 3.52 | 1.50 | 0.26 | Weak Concordant | |||
| JUN_HUMAN | -0.14 | 2.77 | 1.25 | 0.22 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid