rs34373799 chr3:48301516 T>G

Sequence
gttgccctggagggtggcgggttt[T/G]ccaggcgcatgcatttgccgcgga
ASB in cell types
breast tumor CD34+ hematopoietic stem cells 22RV1 (prostate carcinoma) adult erythroblasts
ASB for transcription factors
INT11_HUMAN TIF1B_HUMAN ANDR_HUMAN RBBP5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INT11_HUMAN -2.98 1.54 1.001.3·10-3 2.00 n/a n/a
TIF1B_HUMAN -0.12 3.04 0.793.7·10-3 1.50 n/a n/a
ANDR_HUMAN 2.93 -5.44 7.5·10-31.00 2.00 n/a No Hit
RBBP5_HUMAN 1.98 -3.65 7.6·10-31.00 1.50 n/a n/a
ESR1_HUMAN 2.26 0.08 0.011.00 1.57 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Lung Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Whole_Blood

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