rs34384343 chr12:120291911 T>C
- Sequence
tgccactgcgcaaagctggaaagg[T/C]tctgttcgcgccccgctcccccac
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- GCR_HUMAN CREB1_HUMAN CBX1_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.86 | 0.36 | 1.13 | n/a | No Hit | |||
| CREB1_HUMAN | 1.35 | -0.42 | 1.44 | n/a | No Hit | |||
| CBX1_HUMAN | 3.32 | n/a | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | 2.03 | -0.13 | 1.67 | n/a | No Hit | |||
| NFIB_HUMAN | 1.97 | -0.64 | 1.00 | n/a | No Hit |
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