rs34388940 chr17:80689550 G>T
- Sequence
ttactagatttcaggctttcatca[G/T]atagttagcgaggaagcgcaaaag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN HDAC2_HUMAN MTG16_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 1.49 | 0.22 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 1.89 | n/a | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | 0.92 | n/a | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 1.86 | n/a | 2.00 | n/a | No Hit | |||
| ZEB2_HUMAN | 2.58 | -4.08 | 2.00 | n/a | No Hit |
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