rs34394118 chr19:16279276 C>G
- Sequence
cccacaaagagaataatccagccc[C/G]gaatgtcagtggtgctgaggatag
- ASB in cell types
- MCF10A (breast epithelial cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- TEAD4_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TEAD4_HUMAN | -3.37 | 3.69 | 1.00 | 5.02 | Concordant | |||
| KDM1A_HUMAN | 2.62 | -5.26 | 2.00 | n/a | n/a |
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Motif analysis
