rs34400631 chr9:5627487 G>T
- Sequence
tgttccaggctgctgtgttggact[G/T]ggggagggtagacgccaaggagac
- ASB in cell types
- CD34+ hematopoietic stem cells-derived proerythroblasts macrophages GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts
- ASB for transcription factors
- GATA1_HUMAN CEBPB_HUMAN RBBP5_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 2.77 | -0.30 | 1.62 | n/a | No Hit | |||
| CEBPB_HUMAN | 2.51 | n/a | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.72 | -4.94 | 2.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.24 | -2.06 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood