rs34406403 chr7:155206321 C>T
- Sequence
agtgtgtgtgtgcacgcatacaca[C/T]gcatataactctgctgtggcttct
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZBT17_HUMAN NR2C1_HUMAN NFRKB_HUMAN GMEB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT17_HUMAN | 3.15 | n/a | 2.00 | n/a | No Hit | |||
| NR2C1_HUMAN | 2.87 | -1.38 | 2.00 | n/a | No Hit | |||
| NFRKB_HUMAN | 2.08 | -1.52 | 1.50 | n/a | n/a | |||
| GMEB1_HUMAN | 2.06 | -3.07 | 1.50 | -3.38 | Concordant | |||
| REQU_HUMAN | 1.99 | -2.16 | 1.50 | n/a | n/a |
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Motif analysis
