rs34422800 chr2:18889698 G>A
- Sequence
gtagctatgtttgcacagcagggc[G/A]gcaaacatctgaggaaatgtcact
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SOX13_HUMAN FOXA2_HUMAN TCF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX13_HUMAN | 3.14 | n/a | 2.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.11 | 0.35 | 1.50 | 0.86 | Weak Discordant | |||
| TCF7_HUMAN | 2.54 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
