rs34427788 chr12:53956628 C>T
- Sequence
tccctggcagagagcaaaagaggg[C/T]gccgcctagaacacagtccccact
- ASB in cell types
- foreskin keratinocyte HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN CENPA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.73 | 1.16 | 2.25 | -2.97 | Concordant | |||
| CENPA_HUMAN | 2.22 | -1.69 | 1.00 | n/a | n/a |
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Motif analysis
