rs34431655 chr6:117482513 C>G
- Sequence
tggaggggagcgcgggcggcgcct[C/G]gctcgcctccggcttcgccgtcgg
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia) HepG2 (hepatoblastoma) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- TYY1_HUMAN STAT1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 2.28 | -1.58 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.42 | 0.31 | 1.67 | n/a | No Hit | |||
| CTCF_HUMAN | 0.91 | 0.45 | 1.15 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Stomach, Thyroid, Whole_Blood