rs34445647 chr8:32547272 G>A
- Sequence
ctttagaattctccaccagaggga[G/A]gacaagggaaggagtaggtttcac
- ASB in cell types
- prostate gland glioblastoma cells LNCaP C4-2B (prostate carcinoma) LUHMES (lund human mesencephalic cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.13 | 0.09 | 1.09 | -1.23 | Weak Concordant |
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Motif analysis
