rs34483751 chr15:80054439 C>A

Sequence
gaagtatgtattttatctcctgga[C/A]cagggtttctcaacatgacatgat
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts CD34+ hematopoietic stem cells
ASB for transcription factors
GATA1_HUMAN TIF1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN n/a 2.50 1.002.4·10-3 3.00 0.04 Weak Concordant
TIF1B_HUMAN -2.15 2.95 1.000.01 2.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

GATA1_HUMAN Weak Concordant
GATA1_HUMAN pic

Genetic associations

EMBL-EBI high light scatter reticulocyte count high light scatter reticulocyte percentage of red cells
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Heart_Atrial_Appendage

Download