rs34484228 chr15:89760836 A>G
- Sequence
gactgcctgctgagatgtcctggg[A/G]gacactgcctgccttggtgggaag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.02 | 0.55 | 1.23 | n/a | n/a | |||
| CTCF_HUMAN | 0.82 | 0.56 | 1.19 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Lung, Muscle_Skeletal, Pancreas, Testis, Thyroid