rs34484841 chr19:2598954 T>C
- Sequence
caagctggaaagaagtctagtttc[T/C]agaagcatctccaaaattggaaag
- ASB in cell types
- SU-DHL-10 (diffuse large B-cell lymphoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN IRF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | n/a | 2.84 | 1.00 | 2.42 | Concordant | |||
| IRF5_HUMAN | 1.94 | n/a | 1.00 | 3.01 | Discordant |
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Motif analysis
