rs34490902 chr2:219552220 G>C
- Sequence
gcaccagaatgtgtttcttccctg[G/C]gggtgagggggtcgctagcgaggc
- ASB in cell types
- MS-1 (Small cell lung carcinoma) HEK293 (embryonic kidney) bipolar neuron GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.46 | 2.04 | 1.24 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Heart_Atrial_Appendage, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis