rs34493984 chr10:75605515 T>G
- Sequence
gtcgaaggacaagaaaaagagaag[T/G]taaacatattgaaaggccactgat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.11 | 1.19 | 1.97 | n/a | No Hit | |||
| FOXA1_HUMAN | -4.33 | 1.93 | 2.00 | 4.65 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid, Whole_Blood