rs34498858 chr7:157138643 T>C
- Sequence
cgcacccaacacctcccgcgcccc[T/C]cgccgcgctcccccagcacgcacc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia) HepG2 (hepatoblastoma) NCI-H2171 (small cell lung carcinoma)
- ASB for transcription factors
- MAX_HUMAN SPT5H_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAX_HUMAN | 2.07 | 0.82 | 1.67 | n/a | No Hit | |||
| SPT5H_HUMAN | 1.59 | -0.75 | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | 1.36 | 0.36 | 2.07 | n/a | No Hit |
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