rs34534119 chr17:81094956 G>A
- Sequence
ccgtggcggatgaggtaaaccaaa[G/A]ccgccttggttttttctggaatgc
- ASB in cell types
- breast tumor CTV-1 (Adult T acute lymphoblastic leukemia) thymus-derived CD34- cells
- ASB for transcription factors
- ESR1_HUMAN TCF21_HUMAN FLI1_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.30 | n/a | 2.00 | n/a | No Hit | |||
| TCF21_HUMAN | 1.54 | n/a | 2.50 | n/a | No Hit | |||
| FLI1_HUMAN | -0.98 | 1.37 | 1.11 | n/a | No Hit | |||
| BC11B_HUMAN | 0.12 | 2.55 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellum, Cells_EBV-transformed_lymphocytes, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood