rs34547096 chr4:42657564 C>G

Sequence
tctgggactacaaggtttagctcc[C/G]agccagagcaggaaaggaacgact
ASB in cell types
HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma) primary B-CLL cells pancreas
ASB for transcription factors
CTCF_HUMAN TYY1_HUMAN ANDR_HUMAN
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View in UCSC Genome Browser
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Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.43 0.86 1.1·10-50.94 1.02 n/a No Hit
TYY1_HUMAN -0.26 3.15 0.852.1·10-4 1.25 n/a No Hit
ANDR_HUMAN 2.55 -1.02 1.7·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal

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