rs34549938 chr3:171797110 C>T

Sequence
catcacccttactctccacctgtg[C/T]taggctatactcccactcccatat
ASB in cell types
HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 0.14 2.94 1.008.2·10-3 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Esophagus_Muscularis Lung

Download